List of Publications (59-Articles, 15-Chapters, 4 Editorials and 1 Book

 (2023-2013)

1. Sharma, J., Sharma, D.,* Singh, A., & Sunita, K. (2022). Colistin Resistance and Management of Drug Resistant Infections. Canadian Journal of Infectious Diseases and Medical Microbiology, 2022, 4315030.                                                                                                         (IF-2.585)
2. Shamim, M., Sharma, D., Bisht, D., Maurya, R., Kaashyap, M., Srivastava, D..... Singh, K. N. (2022). Proteo-Molecular Investigation of Cultivated Rice, Wild Rice, and Barley Provides Clues of Defense Responses against Rhizoctonia solani Infection. Bioengineering, 9, 589.                      (IF-5.046)
3. Sharma S., Sharma D., Kalia N. P. (2022) Approaches to address Resistance, Drug Discovery, and Vaccine development in Mycobacterium tuberculosis: Challenges and opportunities. Front. Microbiol. 13, 871464                                                                                                       (IF-6.064)
4. Singh R., Sharma D., Sharma D., Gautam S., Gupta MK., Bisht D. (2022) Unraveling major proteins of Mycobacterium tuberculosis envelope. Current Proteomics, 19, 372-379.                    (IF-0.642)
5. Katiyar A.S., Singh A., Abhishek A., Bhaskar M., Sharma D., Garg V. (2022) Phytoremediation of chromium, iron and nickel by Indian Rice Plant (Oryza sativa L.): An opportunity for management of multi-metal contaminated tannery wastewater. Journal of Experimental Biology and Agricultural Sciences, 10, 511 – 523.                                                                                                                 (IF-Nil)
6. Singh R., Sharma D., Sharma D., Gupta MK., Bisht D. (2022) Analysis of membrane proteins of streptomycin resistant Mycobacterium tuberculosis isolates. Current Proteomics, 19, 388-399.                                                                                    

                                                                                                                                                (IF-0.642)         

1. Sharma, D., Aswal, M., Ahmad, N., Kumar, M., Khan, A.U. (2022) Proteomic analysis of the colistin-resistant E. coli clinical isolate: Explorations of the resistome. Protein and Peptide Letters 29, 184-198.                                                                                                                   (IF-1.927)
2. Kaur, B., Gupta, J., Sharma, S., Sharma, D*., & Sharma, S. (2021). Focused review on dual inhibition of quorum sensing and efflux pumps: A potential way to combat multi drug resistant Staphylococcus aureus infections. International Journal of Biological Macromolecules 190, 33-43.         (IF-8.025)
3. Sharma, D*. Repurposing of the childhood vaccines: could we train the immune system against the SARS-CoV-2? Expert Review of Vaccines 20, 1051-1057.                                                      (IF-5.683)
4. Maciorowski, D., Sharma, D*., Kunamneni, A. (2021) Environmental factors and their role in the transmission of SARS-CoV-2. Biosafety and Health 3, 235-237.                                   (IF-NIL)
5. Negi, SS., Sharma, K., Sharma, D., Singh, P., Agarwala, P., Hussain, N., Bhargava, A., Das, P., Agarwal, S. Genetic analysis of human papilloma virus 16 E6/E7 variants obtained from cervical cancer cases in Chhattisgarh, a central state of India. Virus Disease 32, 492–503.                   (IF-NIL)
6. Sharma, D*., Sharma, J., Singh A. (2021) Exploring the mystery of angiotensin-Converting Enzyme II (ACE2) in the battle against SARS-CoV-2. Journal of the Renin-Angiotensin-Aldosterone System. 2021, 9939929, 1-5.                                                                                        (IF-4.104)
7. Sharma, D*., Kunamneni, A. (2021) Recent progress in the repurposing of drugs/molecules for the management of COVID-19. Expert Review of Anti-infective Therapy 19, 889-897.                                                                                                                                                                                                                                         (IF-5.091)
8. Sharma, J., Sharma, D.* (2021) Prevention and management of SARS-CoV-2 infection among the health care workers. Coronaviruses. 2, e130921191470.                                                   (IF-NIL)
9. Sur, J., Sharma, J., Sharma, D.* (2021) Diabetes might augment the severity of COVID-19: A current prospects. Front. Cardiovasc. Med. 7, 613255.                                                                      (IF-5.846)
10. Sharma, J., Sharma, D*., Sharma, A., Bansal, S. (2021) Thermo stable tyrosinase purified from Pleurotus djamor grown in biomimetic calcium carbonate: A biological strategy to industrial waste remediation. Environmental Technology and Innovation 21, 101294.                                (IF-7.758)
11. Swain, S.S., Sharma, D., Hussain, T., Pati, S. (2020) Molecular mechanisms of underlying genetic factors and associated mutations for drug resistance in Mycobacterium tuberculosis. Emerging Microbes & Infections 9(1), 1651-1663.                                                                                  (IF-19.568)
12. Singhal, N#., Sharma, D#., Kumar. M., Bisht, D., Virdi, J.S. (2020) Comparative proteomics of commensal and pathogenic strains of Escherichia coli. Protein Pept Lett. 27, 1171-11    

 #Both authors contribute equally in this paper                                                                 (IF-1.927)

1. Dhuriya, Y.K., Sharma, D.* (2020) Neuronal Plasticity: Neuronal Organization is Associated with Neurological Disorders. J Mol Neurosci.  70, 1684-1701.                                           (IF-2.866)
2. Sharma, D.,* Sharma. S., Sharma, J. (2020) Potential strategies for the management of drug resistant tuberculosis. Journal of Global Antimicrobial Resistance 22, 210-214                             (IF-4.349)
3. Sharma, D.* (2020) Fluopsin C (metal containing antibiotic): A potential candidate against the deadly drug resistant microbial infections in humans. Future Microbiology 15(6):381-384.             (IF-3.553)
4. Goutam, J., Kharwar, R.N., Tiwari, V.K., Singh, R., Sharma, D.* (2020) Efficient production of the potent antimicrobial metabolite “terrein” from the fungus Aspergillus terreus. Natural Product Communications 15 (3), 1-5.                                                                                  (IF-1.496)
5. Deo, N., Sharma, D., Bisht, D., Venkatesan, K. (2020) Evaluation of the intracellular accumulation of fluoroquinolones in mycobacteria by fluorometric assays. International Journal of Mycobacteriology 9 (1), 34-38.                                                                                                                      (IF-NIL)
6. Gautam, A.K., Sharma, D.,* Sharma, J., Saini, K.C. (2020) Legume lectins: potential use as a diagnostics and therapeutics against the cancer. International Journal of Biological Macromolecules 142, 474-483.                                                                                                           (IF-8.025)
7. Sharma, D., Garg, A., Kumar, M., Rashid, F., Khan, A.U. (2019) Down regulation of flagellar, fimbriae & pili proteins in carbapenem resistant Klebsiella pneumoniae (NDM-4) clinical isolates: A novel linkage to drug resistance. Front. Microbiol. 10:2865.                                                  (IF-6.064)
8. Dhuriya, Y.K., Sharma, D.,* Naik, A.A. (2019) Cellular Demolition: Proteins as a Molecular Players of Programmed Cell Death. International Journal of Biological Macromolecules 138, 492-503.                                                                                                                                               (IF-8.025)
9. Sharma, D., Misba, L., Khan, A.U. (2019) Antibiotics versus Biofilm: An emerging battleground in microbial communities. Antimicrobial Resistance & Infection Control 8,76.                   (IF- 6.454)
10. Sharma, D.,* Lata, M., Faheem, M., Khan, AU., Joshi, B., Venkatesan, K., Shukla, S., and Bisht, D. (2019) Role of M.tuberculosis protein Rv2005c in the aminoglycosides resistance. Microbial Pathogenesis 132,150-155.                                                                              (IF-3.848)
11. Bisht, D., Sharma, D., Sharma, D., Singh, R., Gupta, V.K. (2019) Recent insights into Mycobacterium tuberculosis through proteomics and implications for the clinic. Expert Review of Proteomics 16, 443-456.                                                                             (IF-4.250)
12. Sharma, D., Garg, A., Kumar, M., Khan, A.U. (2019) Proteome profiling of carbapenem-resistant K. pneumoniae clinical isolate (NDM-4): Exploring the mechanism of resistance and potential drug targets. Journal of Proteomics 200,102-110.                                                                    (IF-3.855)
13. Srivastava, D., Shamim, M., Kumar, M., Mishra, A., Maurya, R., Sharma, D., Pandey, P., Singh. K.N. (2019) Role of circadian rhythm in plant system: An update from development to stress response. Environmental and Experimental Botany 162, 256-271.                                                          (IF-6.028)
14. Qayyum, S., Sharma, D., Bisht. D., Khan AU. (2019) Identification of factors involved in Enterococcus faecalis biofilm under quercetin stress. Microbial Pathogenesis. 126, 205-211.                                                                                                                                                                                                             (IF-3.848)
15. Sharma, D., Khan AU. (2018) Role of cell division protein divIVA in Enterococcus faecalis pathogenesis, biofilm and drug resistance: A future perspective by insilico approaches. Microbial Pathogenesis 125, 361-365.                                                                                      (IF-3.848)
16. Sharma, D*, Sharma, J., Deo, N., Bisht, D. (2018) Prevalence and risk factors of tuberculosis in developing countries through health care workers. Microbial Pathogenesis 124, 279-283.                                                                                                                                                          (IF-3.848)
17. Gupta, M., Tomar, R.S., Kaushik, S., Mishra, R.K. and Sharma, D.* (2018) Effective antimicrobial activity of green ZnO nano particles of Catharanthus roseus. Front. Microbiol. 9:2030.     (IF-6.064)
18. Dhuriya, Y.K. and Sharma, D*. (2018) Necroptosis: A Regulated Inflammatory Mode of Cell Death. Journal of Neuroinflammation 15, 199.                                                                                 (IF-9.587)
19. Sharma, D.,* Bisht, D., Khan AU. (2018) Potential Alternative Strategy against Drug Resistant Tuberculosis: A Proteomics Prospect. Proteomes 6(2), 26.                                                             (IF-NIL)
20. Sharma, D.,* Singh, R., Deo, N., Bisht, D. (2018) Interactome analysis of Rv0148 to predict potential targets and their pathways linked to aminoglycosides drug resistance: An insilico approach. Microbial Pathogenesis 121, 179-183.                                                                                                (IF-3.848)
21. Venkatesan, A., Palaniyandi, K., Sharma, D., Bisht, D., Narayanan S. (2018) Characterization of FtsY, its interaction with Ffh and proteomic identification of their potential substrates in Mycobacterium tuberculosis. Canadian Journal of Microbiology 64(4), 243-251.            (IF-2.419)
22. Sharma, D., * Dhuriya, Y.K., Deo, N, and Bisht, D. (2017) Repurposing and revival of the drugs: A new approach to combat the drug resistant tuberculosis. Front. Microbiol. 8, 2452.              (IF-6.064)
23. Kumar, G., Shankar, H., Sharma, D., Sharma, P., Bisht, D., Katoch, V.M., Joshi, B. (2017) Proteomics of culture filtrate of prevalent M. tuberculosis strains: 2D-PAGE map and MALDI-TOF/MS analysis. SLAS Discovery: Advancing the Science of Drug Discovery (R&D) 22, 1142-1149.                                                                                                                       (IF- 3.341)
24. Sharma, D.* and Bisht, D. (2017) Role of bacterioferritin & ferritin in M.tuberculosis pathogenesis and drug resistance: A future perspective by interactomic approach. Front. Cell. Infect. Microbiol. 7, 240.                                                                                                                             (IF-6.073)
25. Sharma, D.* and Bisht, D. (2017) M.tuberculosis hypothetical proteins and proteins of unknown function: Hope for exploring novel resistance mechanisms as well as future target of drug resistance. Front. Microbiol. 8:465.                                                                                                       (IF-6.064)
26. Sharma, D.* and Bisht, D. (2017) Secretory proteome analysis of streptomycin resistant Mycobacterium tuberculosis clinical isolates. SLAS Discovery: Advancing the Science of Drug Discovery 22, 1229-1238.                                                                                     (IF-3.341)

45.    Khan, A., Sharma, D., Faheem, M., Bisht, D., Khan, AU. (2017) Proteomic Analysis of carbapenem resistant Klebsiella pneumoniae strain in response to Meropenem stress. Journal of Global Antimicrobial Resistance 8, 172-178.                                                                                  (IF-4.349)

46.    Deo, N., Sharma, D., Bisht, D., Venkatesan, K. (2017) Incorporation of Radiolabelled Substrates into Mycobacterial Lipids of M. Bovis, BCG and M. Kansasii. J Anal Bioanal Sep Tech 2, 1- 5.         (IF-Nil)

47.    Deo, N., Sharma, D., Bisht, D., Venkatesan, K. (2017) Extraction, Purification and Identification of Phenolic Glycolipids in Various Mycobacterial Species. EC Pulmonology and Respiratory Medicine (2017): 3, 12-19.                                                                                                              (IF-Nil)

1. Sharma, D., Lata, M., Singh, R., Deo, N., Venkatesan, K., Bisht, D. (2016) Cytosolic proteome profiling of aminoglycosides resistant Mycobacterium tuberculosis clinical isolates using MALDI-TOF/MS. Front. Microbiol. 7:1816.                                                                               (IF-6.064)
2. Venkatesan, A., Palaniyandi, K., Sharma, D., Bisht, D., Narayanan S. (2016) Functional characterization of PknI-Rv2159c interaction in redox homeostasis of Mycobacterium tuberculosis. Front. Microbiol. 7:1654.                                                                                             (IF-6.064)
3. Sharma, D., Lata, M., Faheem, M., Khan, AU., Joshi, B., Venkatesan, K., Shukla, S. and Bisht, D. (2016) M.tuberculosis ferritin (Rv3841): Potential involvement in Amikacin (AK) & Kanamycin (KM) resistance. Biochemical and Biophysical Research Communications 478, 908-912.                       (IF-3.322)
4. Sharma, D. and Bisht, D. (2016) An efficient and rapid method for enrichment of lipophilic proteins extraction from Mycobacterium tuberculosis H37Rv for two dimensional gel electrophoresis.  Electrophoresis 37, 1187-1190.                                                                                            (IF-3.595)

52.    Qayyum, S., Sharma, D., Bisht, D. and Khan AU. (2016) Protein translation machinery holds a key for transition of planktonic cells to biofilm state in Enterococcus faecalis: A proteomic approach. Biochemical and Biophysical Research Communications 474, 652-659.                              (IF-3.322)

1. Refaya, A.K., Sharma, D., Kumar, V., Bisht, D., Narayanan, S. (2016) A Serine/threonine Kinase PknL, is involved in the adaptive response of Mycobacterium tuberculosis. Microbiological Research 190, 1-11.                                                                                                                                (IF-5.070)
2. Singhal, N., Kumar, M., Sharma, D., and Bisht, D. (2016) Protein profiling of intraphagosomal expressed proteins of Mycobacterium bovis BCG. Protein Pept Lett., 23(1): 51-54.              (IF- 1.927)
3. Sharma, D., Kumar, B., Lata, M., Joshi, B., Venkatesan, K., Shukla, S., and Bisht, D. (2015) Comparative proteomic analysis of aminoglycosides resistant and susceptible Mycobacterium tuberculosis clinical isolates for exploring potential drug targets. PLoS ONE 10(10): e0139414.                                                                                                                                               (IF- 3.752)
4. Sharma, D., Lata, M., Faheem, M., Khan, AU., Joshi, B., Venkatesan, K., Shukla, S., and Bisht, D. (2015) Cloning, expression and correlation of Rv0148 to amikacin & kanamycin resistance. Current Proteomics 12(2):96-100.                                                                                                                   (IF- 0. 642)
5. Lata, M#., Sharma, D#., Deo, N., Tiwari, PK., Bisht, D. and Venkatesan, K. (2015) Proteomic analysis of ofloxacin-mono resistant Mycobacterium tuberculosis isolates. Journal of Proteomics 127, Part A,: 114-121.                                                                                                                                (IF-3.855)

            #Both authors contribute equally in this paper

1. Lata, M., Sharma, D., Kumar, B., Deo, N., Tiwari, PK., Bisht, D. and Venkatesan, K. (2015) Proteome analysis of ofloxacin and moxifloxacin induced Mycobacterium tuberculosis isolates by proteomic approach. Protein Pept Lett. 22(4):362-371.                                                           (IF-1.927)
2. Kumar, B., Sharma, D., Sharma, P., Katoch, V.M., Venkatesan, K. and Bisht, D. (2013) Proteomic analysis of Mycobacterium tuberculosis isolates resistant to kanamycin and amikacin. Journal of Proteomics 94: 68-77.                                                                                                   (IF-3.855)

Chapters Published in Books: (15)

1. Singh A., Gupta A.K., Katiyar A.S., Sharma D.,* Mechanisms of biofilm-based antibiotic resistance and tolerance in Mycobacterium tuberculosis. Bacterial Survival in the Hostile Environment. 978-0-323-91806-0.  Elsevier (August, 2023)
2. Sharma, J., Gautam, J., Dhuriya YK, Sharma, D.* Bioremediation of industrial pollutants. Microbial Rejuvenation of Polluted Environment (Vol-II) pp 1-31. Springer (January, 2021)
3. Gautam, J., Sharma, J., Singh, R., Sharma, D.* Fungal mediated bioremediation of heavy metal polluted environment. Microbial Rejuvenation of Polluted Environment (Vol-II) pp 51-76. Springer (January, 2021)
4. Sharma, D.,* Sharma, J., Deo, N., Bisht, D. Overview and challenges in protein sample preparation for 2-DGE in bacterial proteomics. Microbial Proteomics: Development in technologies and applications Volume I, pp 138-146. Bentham Science Publisher (January, 2021)
5. Yadav, ML., Verma, AK., Rawat, P., Parashar, A., Sharma, D., Kumar, S., Mohanty, AK. Past, present, and future of gel-based microbial proteomics. Microbial Proteomics: Development in technologies and applications Volume I, pp 18-35. Bentham Science Publisher (January, 2021)
6. Sharma, A., Singh, C., Raval, G., Dave, K., Mathur, A., Sharma, J., Sharma, D.* Emerging paradigm of post translational modifications in microbes: An undefeatable weapon. Microbial Proteomics: Development in technologies and applications Volume I, pp 76-121. Bentham Science Publisher (January, 2021)
7. Dhuriya, YK., Sharma, D.* Pupylation: A novel proteolysis pathway in prokaryotes functionally reminiscent to eukaryotic ubiquitination. Microbial Proteomics: Development in technologies and applications Volume I, pp 122-137. Bentham Science Publisher (January, 2021)
8. Kumar, MM., Gupta, VK., Sharma, D. Proteomics based biomarker development against infections: An overview. Microbial Proteomics: Development in technologies and applications Volume I, pp 147-166. Bentham Science Publisher (January, 2021)
9. Gupta AK., Sharma, D., Singh, A. Proteomics of Mycobacterium tuberculosis: An overview. Microbial Proteomics: Development in technologies and applications Volume I, pp 179-203. Bentham Science Publisher (January, 2021)
10. Sharma, J., Sharma, D., Sharma, A., Vishwakarma, V., Dubey, A., Namdeo, H. The contribution of microbial biotechnology for achieving sustainable development. Microbial Biotechnology Basic research and applications pp1-18. Springer (July, 2020)
11. Sharma, D.,* Sharma, J., Dhuriya, Y.K. Nanotechnology: A novel strategy against plant pathogen. Nanotechnology for Agriculture: Crop Production & Protection Volume II, pp 153-170. Springer (December, 2019)
12. Sharma, D.,* Dhuriya, Y.K., Sharma, J., Gupta, M. Nanoelements: An agricultural paradigm for targeted plant nutrition therapeutic approach. Nanotechnology for Agriculture: Crop Production & Protection Volume II, pp 73-83. Springer (December, 2019)
13. Gupta, M., Sharma, D. Impact and current perspectives of zinc oxide nanoparticles on soil. Nanotechnology for Agriculture: Advances for Sustainable Agriculture Volume I, pp 131-144 Springer (November, 2019)
14. Tiwari, D. and Sharma, D. Early diagnosis of Mycobacterium tuberculosis using next generation sequencing. Diagnosis and Management of Tuberculosis Volume 2, Chapter 4 (October 2018).
15. Shamim, Md., Sharma, D., Bisht, D., Hussain, R., Khan, N.A., Pandey, P., Kesari, R., and Singh, K.N. Molecular Tools for Controlling of Sheath Blight Disease of Rice and Its Management. Biotic Stress Management in Rice Apple Academic Press. (June, 2017)

• 1. Sharma, D. “Microbial Proteomics:  Development in Technologies and Applications” (Volume I) Series Title: Current and Future Developments in Proteomics. Bentham Science Publisher (January, 2021) ISBN: 978-981-14-9142-9 (Print); ISBN: 978-981-14-9141-2 (Online); DOI:10.2174/97898114914121200101
•  

1. Sharma S., Sharma D., Kalia N. P. (2022) Approaches to address Resistance, Drug Discovery, and Vaccine development in Mycobacterium tuberculosis: Challenges and opportunities. Front. Microbiol. (In-Press)                                                                                                                             (IF-5.640)
2. Sharma, D.* (2020) Fluopsin C (metal containing antibiotic): A potential candidate against the deadly drug resistant microbial infections in humans. Future Microbiology 15(6):381-384.                                                                                                                                                                        (IF-3.165)
3. Sharma, D *., Bisht, D., Garg, R. (2018) Clinical proteomics and bioinformatics: Exploring drug resistant tuberculosis. J. Proteomics Bioinform. 11(11) e37. 
4. Sharma, D.,* Deo, N., Bisht, D. (2017) Proteomics and Bioinformatics: A modern way to elucidate the resistome in Mycobacterium tuberculosis. J. Proteomics Bioinform. 10, e33.

ABSTRACT PROCEEDINGS PUBLISHED:

1. Singh, A., Gupta, A.K., Gopinath, K., Sharma, D., Sharma, P., Bisht, D., Sharma, P., Singh. S. Comparative proteomic analysis of sequential isolates of Mycobacterium tuberculosis sensitive and resistant Beijing type from a patient with pulmonary tuberculosis. International Journal of Mycobacteriology; 2016, 5, S123-S124.                                                                    (IF-Nil)
2. Bisht, D., Sharma, D., Kumar, B., Lata, M., Joshi, B., Venkatesan, K., and Shukla, S. Profiling the membrane proteome of aminoglycosides resistant Mycobacterium tuberculosis isolates. Proceedings, Ind J Clin Biochem; 2015, Vol. 30. (Suppl . 1-S57)                            (IF-Nil)
3. Sharma, D.,* Shankar, H.,  Lata, M.,  Joshi, B., Venkatesan, K. and Bisht D. Culture filtrate proteome analysis of aminoglycoside resistant clinical isolates of Mycobacterium tuberculosis. Proceedings, BMC Infectious Diseases 2014, 14(Suppl.):P60                                   (IF-2.620)
4. Singh, A., Mishra, R., Sharma, D., Chandra, V., Kumar, A., Prakash, J. and Gupta, V.  Role of oxidative stress and scavengers in the pathophysiology of Rheumatoid arthritis and Osteoarthritis. Proceedings, Ind J Clin Biochem; December 2008, Vol. 23. (Suppl.)  (IF-Nil)